Kinase Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_02847T0
SpeciesCryptococcus neoformans var. grubii H99
Gene Annotationthymidylate kinase
Gene SymbolUnknown
Kinase SuperfamilyP-loop containing nucleoside triphosphate hydrolases
Kinase FamilyNucleotide and nucleoside kinases
KEGG Linkout KEGG::CNC04630 
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Kinase Prediction N/A
Functional Annotation
KEGG Annotation
KO AccessionE-valueScore
K00943 KEGG 1e-73 247.6
Pfam Annotation
Pfam AccessionE-valueScore
PF02223 Pfam 4.7e-46 155.4
Amino Acid SequenceMSTSTRGAFIVFEGLDRCGKSTQVDRLVQRLEHQGHRARLQKFPDRTTQIGKMIDAYLQSKTEIDDRAIHLLFSANRWECSATIRRDLANGVTVIADRYAFSGIAFSVAKGLPFDFCLQPDAGLPLPDVTLYLTLSPEAAAKRSAYGEERYESVSVQQAVRQQFKLVADEIKKRHGSDKWIEIEADGTIEDVEERIWSQISDVVEHSNGDIGDLWSR
Expression Data
Notation Condition Normalized Raw Expression
A YPD 30°C, concentration: 2x 10^8 cells/ml 489
B YPD 30°C, concentration: 5x10^7 cells/ml 1102
C YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 1004
D YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 1641
E YPD 37°C, concentration: 5x10^7 cells/ml 1248
F YP+galactose 30°C, concentration: 2x10^8 cells/ml 563
Gene Disruption Strategy
Mutant construction design
Primer NameDescriptionPrimer Sequence
L1CNAG_02847 5' flanking region primer 1AGACCGATAAAAACAGGACC
L2CNAG_02847 5' flanking region primer 2TCACTGGCCGTCGTTTTACAACAATGAAGGCACCTCG
R1CNAG_02847 3' flanking region primer 1CATGGTCATAGCTGTTTCCTGGGAACATTCAAACGGAGAC
R2CNAG_02847 3' flanking region primer 2ACCAGTTGACAAAGGTATCG
SOCNAG_02847 diagnostic screening primer, pairing with B79AAGAATACTCCAGAAGGGACC
POCNAG_02847 Southern blot probe primerGCTTCTGGGGATAAGGTGAG
STMNAT#296 STM primerCGCCCGCCCTCACTATCCAC
STM commonSTM common primerGCATGCCCTGCCCCTAAGAATTCG