Kinase Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_02285T0
SpeciesCryptococcus neoformans var. grubii H99
Gene Annotationnucleoside diphosphate kinase
Gene SymbolUnknown
Kinase SuperfamilyNucleoside diphosphate kinase, NDK
Kinase FamilyNucleoside diphosphate kinase, NDK
KEGG Linkout KEGG::CNE02610 
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Kinase Prediction N/A
Functional Annotation
KEGG Annotation
KO AccessionE-valueScore
K00940 KEGG 3e-80 268.1
Pfam Annotation
Pfam AccessionE-valueScore
PF00334 Pfam 1.5e-56 188.6
Amino Acid SequenceMSTTEQTYIMIKPDGVQRGLVGEIIGRFEKRGFKLVALKLHTPTKEHLEKHYSDLSSKPFFPRLVEYMMSGPVVCMVWEGLDAVKTGRVMLGATNPLASAPGTIRGDYALQVGMNVCHGSDSVENGQKEIALWFPEGINQYKLSSQAWLYEA
Expression Data
Notation Condition Normalized Raw Expression
A YPD 30°C, concentration: 2x 10^8 cells/ml 7064
B YPD 30°C, concentration: 5x10^7 cells/ml 33921
C YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 29651
D YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 48969
E YPD 37°C, concentration: 5x10^7 cells/ml 37846
F YP+galactose 30°C, concentration: 2x10^8 cells/ml 5037
Gene Disruption Strategy
Mutant construction design
Primer NameDescriptionPrimer Sequence
L1CNAG_02285 5' flanking region primer 1TCCTCTGTTCTTGTCGTGG
L2CNAG_02285 5' flanking region primer 2TCACTGGCCGTCGTTTTACCTGCTCAGTGGTAGACATTTTG
R1CNAG_02285 3' flanking region primer 1CATGGTCATAGCTGTTTCCTGTTCTCAGGCTTGGCTCTAC
R2CNAG_02285 3' flanking region primer 2CGCCCTGTGATGATAATAACCTTC
SOCNAG_02285 diagnostic screening primer, pairing with B79TGGACAAAGGGACACTTACC
POCNAG_02285 Southern blot probe primerTGACAACACCAACGATGG
STMNAT#150 STM primerACATACACCCCCATCCCCCC
STM commonSTM common primerGCATGCCCTGCCCCTAAGAATTCG