Detailed Locus Information for CNAG_04108T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
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| Gene Annotation | pyruvate dehydrogenase kinase | ||||||||||||||||||
| Gene Symbol | PKP2 | ||||||||||||||||||
| Kinase Superfamily | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | ||||||||||||||||||
| Kinase Family | alpha-ketoacid dehydrogenase kinase, C-terminal domain | ||||||||||||||||||
| KEGG Linkout | KEGG::CNI04400 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction |
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| Functional Annotation |
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| Amino Acid Sequence | MSKFRISSALWDKIHHFASFPQTGVSLQQMILFGQNPSQGTLLKASQFLSEELPIRLSHRVVELEGLPDGLSKMPSINTVKEWYAQSFDELVSFPRPRLKPELEDILRIPPAPTQPFPSATPNPSLDPLMREGPVGSGFVSERHIGTGGNGIGVGKRLRIPIERRYFSPPPPTIIYPPEVHDYNEKFTQLLQVIKHRHDPTVTTVAQGVLEWKRTQKTSVIGTPIQEFLDRFYMSRIGIRFLIGQHIALNTLPPHPDYVGIICTRANIHDICQEAIDNARYVCEEHYALFKSPNIKLVCPPNLTFPYIPGHLSHICFELLKNSLRAVVERYGVDNDDEYPPIKVVVVEGREDITIKISDEGGGIPRSAIPHIWTYLYTTMSDEGLEDTIQGSDFKAPMAGFGYGLPLSRLYARFFGGDLRLISMDGYGTDVYISLNKLSSSREPLQ | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 5533 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 4353 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 4486 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 3022 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 2382 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 3010 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_04108 5' flanking region primer 1 | AAAAGAGGAGGGAGAAGGG |
| L2 | CNAG_04108 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACTGAAGTATCCACACACCCC |
| R1 | CNAG_04108 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGCGTCTTTGAGTTAGGTGCTG |
| R2 | CNAG_04108 3' flanking region primer 2 | TGATTGGGGAAGCGTTAG |
| SO | CNAG_04108 diagnostic screening primer, pairing with B79 | TGTCGGTTTTGTGGTTCC |
| PO | CNAG_04108 Southern blot probe primer | TTAGCCTCTTGCCAACTCC |
| STM | NAT#295 STM primer | ACACCTACATCAAACCCTCCC |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |
Phenotype Assays
| Growth | |
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| Mating Data | |
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| Virulence Factor Production | |
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Capsule
Urease
Melanin
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| Stress Response and Adaptation | |
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Osmotic Stress
Oxidative Stress
Heavy Metal Stress
Cell Wall Stress
ER Stress
Genotoxic Stress
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| Antifungal Drug Susceptibility | |
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| Virulence Data by the Insect Host Model (Galleria mellonella) | |
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| Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model | |
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